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T...G S

stack from AC step

From Dataset: JSCH-2005 – benchmark noncovalent complexes

Dataset reference: P. Jurecka, J. Sponer, J. Cerny, P. Hobza; Phys Chem Chem Phys 2006, 8 (17), 1985-1993

Optimization level: Crystal, PDB ID 5DNB, Dickerson decamer (sugar units substituted by methyl groups, hydrogens added to experimental structure and optimized at)

Tags: Complex, JSCH-2005, stack


Structure:

37

N    16.2460000     9.7810000     5.9650000
C    17.5950000    10.0510000     5.9930000
C    18.0920000    11.2690000     5.9020000
C    17.1390000    12.3410000     5.7640000
O    17.4920000    13.5330000     5.6630000
N    15.8280000    12.0550000     5.7130000
C    15.3100000    10.7970000     5.7960000
O    14.1120000    10.5770000     5.7580000
H    18.2280000     9.1744860     6.1031120
C    19.5529600    11.6051630     5.9357380
H    20.1631860    10.7042230     6.0438290
H    19.7760320    12.2828240     6.7658180
H    19.8526100    12.1260780     5.0209680
H    15.1383860    12.8499570     5.6472680
C    15.7717470     8.4029560     6.0779300
H    14.6864640     8.4223240     6.0045990
H    16.1825380     7.7884380     5.2708940
H    16.0652090     7.9755790     7.0417370
C    18.8920000     9.6580000     9.7710000
N    18.5280000    11.0700000     9.5880000
C    19.3770000    12.1420000     9.6130000
N    18.7760000    13.3090000     9.4320000
C    17.4530000    12.9640000     9.3170000
C    16.2780000    13.7530000     9.1210000
O    16.2220000    14.9840000     9.0220000
N    15.1360000    13.0410000     9.0450000
C    15.0850000    11.6720000     9.1350000
N    13.8450000    11.1640000     9.0360000
N    16.1360000    10.8810000     9.3170000
C    17.2760000    11.5910000     9.3940000
H    14.2561290    13.5779040     8.9264920
H    13.0354310    11.7259420     8.7508330
H    13.7773690    10.1594100     9.0211800
H    17.9880060     9.0643740     9.6322420
H    19.2851540     9.4890700    10.7774400
H    19.6407390     9.3607520     9.0321720
H    20.4431070    12.0114850     9.7460660


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Reference: I. Dabkowská, H. V. Gonzalez, P. Jurečka, P. Hobza; J Phys Chem A 2005, 109, 1131–1139


Energies:

method counterpoise corrected remark value
CCSD(T)/CBS no -6.2