Home Features All Datasets Advanced search How to cite FAQ Contact

G...C S2

stack from hairpin

From Dataset: JSCH-2005 – benchmark noncovalent complexes

Dataset reference: P. Jurecka, J. Sponer, J. Cerny, P. Hobza; Phys Chem Chem Phys 2006, 8 (17), 1985-1993

Optimization level: NMR, hairpin, PDB ID 1PQT (sugar units substituted by methyl groups, hydrogens added to experimental structure and optimized at)

Tags: Complex, JSCH-2005, stack


Structure:

29

H     3.1762460     2.3738070     2.9634160
N     2.3770000     1.8470000     3.2830000
C     1.6370000     2.2160000     4.3790000
H     1.9902970     3.0843050     4.9210710
C     0.5610000     1.4930000     4.7730000
H    -0.0085000     1.7736330     5.6470440
C     0.1830000     0.3990000     3.9430000
N    -0.8510000    -0.3400000     4.2540000
H    -1.1799330    -1.0651510     3.5908230
H    -1.4362750    -0.1022370     5.0377650
N     0.8500000     0.0580000     2.8540000
C     1.9550000     0.7640000     2.4990000
O     2.5580000     0.4150000     1.4830000
H     0.0112670     4.2441280     0.3057270
N    -0.1600000     4.2010000     1.2990000
C     0.1490000     5.1520000     2.2350000
H     0.8336150     5.9557770     2.0023890
N    -0.3040000     4.9000000     3.4380000
C    -1.1470000     3.7970000     3.2290000
C    -2.0790000     3.1160000     4.0900000
O    -2.3440000     3.3110000     5.2740000
N    -2.7730000     2.0930000     3.4630000
H    -3.4444620     1.6202680     4.0533010
C    -2.5700000     1.7190000     2.1650000
N    -3.2200000     0.6740000     1.7040000
H    -3.7884800     0.1079360     2.3113460
H    -3.0424470     0.3264300     0.7529310
N    -1.7100000     2.3160000     1.3470000
C    -1.0480000     3.3630000     1.9240000


save structure as file..



Reference: I. Dabkowská, H. V. Gonzalez, P. Jurečka, P. Hobza; J Phys Chem A 2005, 109, 1131–1140


Energies:

method counterpoise corrected remark value
CCSD(T)/CBS no -7.7