Home Features All Datasets Advanced search How to cite FAQ Contact

WG_09

dipeptide Trp-Gly, neutral, COOH and NH2 endings

From Dataset: Set of 5 small peptides containing aromatic side chain including set P26

Dataset reference: Valdes, H.; Pluháčková, K.; Pitoňák, M.; Řezáč, J. and Hobza, P. Phys. Chem. Chem. Phys., 2008, 10, 2747–2757

Optimization level: MP2/cc-pVTZ (RI (Resolution of Identity approximation))




Structure:

34

O      0.39506      2.35394      2.54175
C      0.90194      1.31466      1.85598
O      1.77166      1.41854      1.01958
H      0.83025      3.14297      2.18468
C      0.27676      0.01616      2.29032
H     -0.80838      0.09250      2.24066
H      0.54407     -0.15866      3.33477
N      0.73368     -1.03923      1.42296
H      1.49115     -0.78509      0.80348
C     -0.13144     -2.00064      1.00648
O     -1.22558     -2.19000      1.53068
C      0.32995     -2.83062     -0.18441
H      1.41763     -2.78591     -0.26782
N     -0.07760     -4.22566     -0.08962
H     -1.05373     -4.22759      0.19380
H      0.41582     -4.66211      0.68157
C     -0.27982     -2.22419     -1.46046
H     -1.36588     -2.32171     -1.38534
H      0.04307     -2.84588     -2.29560
C      0.09344     -0.79585     -1.67879
C      1.19083     -0.33319     -2.37763
H      1.93956     -0.88781     -2.92022
N      1.22826      1.03941     -2.33494
H      1.94693      1.61193     -2.74087
C      0.16747      1.50114     -1.60176
C     -0.20200      2.80501     -1.26762
H      0.37187      3.65891     -1.60414
C     -1.33324      2.96531     -0.48046
H     -1.65208      3.96125     -0.20350
C     -2.08156      1.85352     -0.04305
H     -2.95907      2.01769      0.56783
C     -1.71708      0.55881     -0.38052
H     -2.29519     -0.28684     -0.03008
C     -0.57113      0.36509     -1.17197

save structure as file..



Energies:

method counterpoise corrected remark value
CCSD(T)/CBS (cc-pVTZ to cc-pVQZ extrapolation at MP2 level, CCSD(T) correction in 6-31G* basis set) no cc-pVTZ to cc-pVQZ extrapolation at MP2 level, CCSD(T) correction in 6-31G* basis set 0.07
MP2/CBS (cc-pVTZ to cc-pVQZ extrapolation) no cc-pVTZ to cc-pVQZ extrapolation 0.02
SCS-MP2/CBS (cc-pVTZ to cc-pVQZ extrapolation, SCS scaling factors: 6/5 and 1/3) no cc-pVTZ to cc-pVQZ extrapolation, SCS scaling factors: 6/5 and 1/3 -0.24
MP3/CBS (cc-pVTZ to cc-pVQZ extrapolation at MP2 level, MP3 correction in 6-31G* basis set) no cc-pVTZ to cc-pVQZ extrapolation at MP2 level, MP3 correction in 6-31G* basis set -0.1
SCC-DFTB-D no 0.37
AMBER ff99 (HF/6-31G* RESP charges) no HF/6-31G* RESP charges 0.84
AMBER ff99 (B3LYP/cc-pVTZ RESP charges) no B3LYP/cc-pVTZ RESP charges -1.97
DFT TPSS/6-311++G(3df,3pd) no 1.53
DFT-D TPSS/6-311++G(3df,3pd) no 1.12
DFT B3LYP/6-311++G(3df,3pd) no 0.76
DFT M06-2X/6-311+G(2df,2p) no -0.52
DFT BH&H/6-311++G(d,p) no 1.25
DFT-D PBE/6-311++G(3df,3pd) no 0.78