Home Features All Datasets Advanced search How to cite FAQ Contact

GGF_14

tripeptide Gly-Gly-Phe, neutral, COOH and NH2 endings

From Dataset: Set of 5 small peptides containing aromatic side chain including set P26

Dataset reference: Valdes, H.; Pluháčková, K.; Pitoňák, M.; Řezáč, J. and Hobza, P. Phys. Chem. Chem. Phys., 2008, 10, 2747–2757

Optimization level: MP2/cc-pVTZ (RI (Resolution of Identity approximation))

Tags: P26, 2 h-bond, OH-O, NH-O


Structure:

37

O     -4.26934     -0.60313     -1.30318
C     -3.49169     -0.17338     -0.48379
O     -3.89032      0.46214      0.62136
H     -3.10115      0.69690      1.17024
C     -1.98513     -0.39392     -0.62941
H     -1.83554     -0.69674     -1.66228
N     -1.17916      0.80487     -0.44413
H     -0.53980      1.07694     -1.19276
C     -0.96245      1.39946      0.73770
O     -1.60328      1.15575      1.77118
C      0.14459      2.44425      0.71639
H      0.17193      2.91193      1.69490
H     -0.09434      3.19572     -0.03857
N      1.44467      1.87951      0.42337
H      2.15884      1.78420      1.13291
C      1.83024      1.55613     -0.82230
O      1.09422      1.62218     -1.81223
C      3.27907      1.12451     -0.94379
H      3.78741      1.92665     -1.47845
H      3.28925      0.24736     -1.59325
N      3.90977      0.92673      0.35791
H      4.90462      1.09312      0.30076
H      3.78092     -0.03274      0.65394
C     -1.55121     -1.54220      0.30030
H     -1.86974     -1.33066      1.31932
H     -2.07849     -2.43868     -0.03207
C     -0.06556     -1.76171      0.27364
C      0.58279     -2.14822     -0.90460
H      0.00882     -2.28529     -1.81316
C      1.95452     -2.38618     -0.91853
H      2.43669     -2.70305     -1.83362
C      2.69986     -2.24548      0.25311
H      3.75904     -2.46935      0.25127
C      2.06826     -1.83844      1.42790
H      2.63649     -1.73146      2.34294
C      0.69630     -1.58812      1.43170
H      0.20412     -1.27420      2.34384

save structure as file..



Energies:

method counterpoise corrected remark value
CCSD(T)/CBS (cc-pVTZ to cc-pVQZ extrapolation at MP2 level, CCSD(T) correction in 6-31G* basis set) no cc-pVTZ to cc-pVQZ extrapolation at MP2 level, CCSD(T) correction in 6-31G* basis set -1.45
MP2/CBS (cc-pVTZ to cc-pVQZ extrapolation) no cc-pVTZ to cc-pVQZ extrapolation -1.46
SCS-MP2/CBS (cc-pVTZ to cc-pVQZ extrapolation, SCS scaling factors: 6/5 and 1/3) no cc-pVTZ to cc-pVQZ extrapolation, SCS scaling factors: 6/5 and 1/3 -1.07
MP3/CBS (cc-pVTZ to cc-pVQZ extrapolation at MP2 level, MP3 correction in 6-31G* basis set) no cc-pVTZ to cc-pVQZ extrapolation at MP2 level, MP3 correction in 6-31G* basis set -1.23
SCC-DFTB-D no -1.56
AMBER ff99 (HF/6-31G* RESP charges) no HF/6-31G* RESP charges -6.64
AMBER ff99 (B3LYP/cc-pVTZ RESP charges) no B3LYP/cc-pVTZ RESP charges -5.29
DFT TPSS/6-311++G(3df,3pd) no -2.48
DFT-D TPSS/6-311++G(3df,3pd) no -2.93
DFT B3LYP/6-311++G(3df,3pd) no -1.87
DFT M06-2X/6-311+G(2df,2p) no -0.71
DFT BH&H/6-311++G(d,p) no -1.99
DFT-D PBE/6-311++G(3df,3pd) no -2.61