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GGF_07

tripeptide Gly-Gly-Phe, neutral, COOH and NH2 endings

From Dataset: Set of 5 small peptides containing aromatic side chain including set P26

Dataset reference: Valdes, H.; Pluháčková, K.; Pitoňák, M.; Řezáč, J. and Hobza, P. Phys. Chem. Chem. Phys., 2008, 10, 2747–2757

Optimization level: MP2/cc-pVTZ (RI (Resolution of Identity approximation))

Tags: 1 h-bond, NH-O


Structure:

37

O      4.09057      1.44017      0.64458
C      3.44083      0.44648      0.41037
O      3.91523     -0.80338      0.57454
H      4.82714     -0.68585      0.88365
C      2.01918      0.48234     -0.12035
H      2.11357      0.73196     -1.17963
N      1.34054     -0.78052     -0.06265
H      0.93571     -1.09533      0.81708
C      0.89002     -1.39090     -1.18679
O      1.17134     -1.04346     -2.32873
C     -0.05484     -2.54741     -0.88554
H      0.39776     -3.21855     -0.15494
H     -0.23970     -3.08240     -1.81110
N     -1.31411     -2.06537     -0.35434
H     -2.13098     -1.94255     -0.93785
C     -1.46941     -1.70060      0.92913
O     -0.56873     -1.73054      1.77407
C     -2.87512     -1.25499      1.28889
H     -2.76600     -0.39657      1.95431
H     -3.31377     -2.06437      1.87277
N     -3.69312     -1.01004      0.10512
H     -3.56201     -0.05307     -0.20336
H     -4.67361     -1.12138      0.32216
C      1.23276      1.57023      0.61698
H      1.22713      1.33686      1.68442
H      1.77267      2.51151      0.50639
C     -0.18793      1.71753      0.14005
C     -1.18963      2.04745      1.05866
H     -0.93623      2.12984      2.10851
C     -2.49790      2.28831      0.64271
H     -3.25209      2.56299      1.36854
C     -2.82875      2.18515     -0.70865
H     -3.83860      2.38916     -1.04031
C     -1.84642      1.82127     -1.62938
H     -2.09432      1.72485     -2.67784
C     -0.53736      1.59182     -1.20926
H      0.20509      1.30644     -1.94251

save structure as file..



Energies:

method counterpoise corrected remark value
CCSD(T)/CBS (cc-pVTZ to cc-pVQZ extrapolation at MP2 level, CCSD(T) correction in 6-31G* basis set) no cc-pVTZ to cc-pVQZ extrapolation at MP2 level, CCSD(T) correction in 6-31G* basis set 0.51
MP2/CBS (cc-pVTZ to cc-pVQZ extrapolation) no cc-pVTZ to cc-pVQZ extrapolation 0.65
SCS-MP2/CBS (cc-pVTZ to cc-pVQZ extrapolation, SCS scaling factors: 6/5 and 1/3) no cc-pVTZ to cc-pVQZ extrapolation, SCS scaling factors: 6/5 and 1/3 0.36
MP3/CBS (cc-pVTZ to cc-pVQZ extrapolation at MP2 level, MP3 correction in 6-31G* basis set) no cc-pVTZ to cc-pVQZ extrapolation at MP2 level, MP3 correction in 6-31G* basis set 0.45
SCC-DFTB-D no -0.84
AMBER ff99 (HF/6-31G* RESP charges) no HF/6-31G* RESP charges 1.07
AMBER ff99 (B3LYP/cc-pVTZ RESP charges) no B3LYP/cc-pVTZ RESP charges 0.97
DFT TPSS/6-311++G(3df,3pd) no -0.23
DFT-D TPSS/6-311++G(3df,3pd) no 0.19
DFT B3LYP/6-311++G(3df,3pd) no -0.29
DFT M06-2X/6-311+G(2df,2p) no 0.83
DFT BH&H/6-311++G(d,p) no 0.47
DFT-D PBE/6-311++G(3df,3pd) no -0.16