Home Features All Datasets Advanced search How to cite FAQ Contact

GGF_15

tripeptide Gly-Gly-Phe, neutral, COOH and NH2 endings

From Dataset: Set of 5 small peptides containing aromatic side chain including set P26

Dataset reference: Valdes, H.; Pluháčková, K.; Pitoňák, M.; Řezáč, J. and Hobza, P. Phys. Chem. Chem. Phys., 2008, 10, 2747–2757

Optimization level: MP2/cc-pVTZ (RI (Resolution of Identity approximation))

Tags: 2 h-bond, OH-O, NH-O


Structure:

37

O      3.83330     -1.49153     -1.00528
C      3.34616     -0.68752     -0.24719
O      4.06392      0.27954      0.33529
H      3.46761      0.82235      0.90393
C      1.86498     -0.69314      0.14503
H      1.82912     -0.75851      1.23656
N      1.21678      0.55577     -0.22151
H      0.56296      0.58913     -1.00232
C      1.31199      1.64638      0.55536
O      2.11501      1.74035      1.49343
C      0.34782      2.76745      0.20584
H      0.60003      3.15166     -0.78377
H      0.48092      3.55480      0.94053
N     -1.03414      2.34199      0.19635
H     -1.63809      2.46298      0.99795
C     -1.58320      1.70018     -0.85161
O     -0.95162      1.37875     -1.86218
C     -3.06677      1.42373     -0.70647
H     -3.27068      0.50920     -1.26364
H     -3.58640      2.24042     -1.20921
N     -3.46619      1.39403      0.69776
H     -4.46211      1.54458      0.78432
H     -3.27443      0.47278      1.07741
C      1.11867     -1.85875     -0.48109
H      1.20849     -1.79511     -1.56598
H      1.62563     -2.77807     -0.18695
C     -0.33090     -1.89762     -0.07552
C     -0.70015     -1.93578      1.27440
H      0.06395     -1.92366      2.04184
C     -2.03966     -2.00942      1.64838
H     -2.30368     -2.05045      2.69680
C     -3.03699     -2.05685      0.67254
H     -4.07660     -2.14306      0.95971
C     -2.68177     -2.01503     -0.67466
H     -3.44561     -2.06122     -1.43964
C     -1.33934     -1.92499     -1.04178
H     -1.07020     -1.88348     -2.08937

save structure as file..



Energies:

method counterpoise corrected remark value
CCSD(T)/CBS (cc-pVTZ to cc-pVQZ extrapolation at MP2 level, CCSD(T) correction in 6-31G* basis set) no cc-pVTZ to cc-pVQZ extrapolation at MP2 level, CCSD(T) correction in 6-31G* basis set -1.84
MP2/CBS (cc-pVTZ to cc-pVQZ extrapolation) no cc-pVTZ to cc-pVQZ extrapolation -1.46
SCS-MP2/CBS (cc-pVTZ to cc-pVQZ extrapolation, SCS scaling factors: 6/5 and 1/3) no cc-pVTZ to cc-pVQZ extrapolation, SCS scaling factors: 6/5 and 1/3 -1.5
MP3/CBS (cc-pVTZ to cc-pVQZ extrapolation at MP2 level, MP3 correction in 6-31G* basis set) no cc-pVTZ to cc-pVQZ extrapolation at MP2 level, MP3 correction in 6-31G* basis set -1.9
SCC-DFTB-D no -2.31
AMBER ff99 (HF/6-31G* RESP charges) no HF/6-31G* RESP charges -5.38
AMBER ff99 (B3LYP/cc-pVTZ RESP charges) no B3LYP/cc-pVTZ RESP charges -4.64
DFT TPSS/6-311++G(3df,3pd) no -3.37
DFT-D TPSS/6-311++G(3df,3pd) no -2.38
DFT B3LYP/6-311++G(3df,3pd) no -3
DFT M06-2X/6-311+G(2df,2p) no -1.37
DFT BH&H/6-311++G(d,p) no -2.84
DFT-D PBE/6-311++G(3df,3pd) no -2.71