Home Features All Datasets Advanced search How to cite FAQ Contact

FGG_412

tripeptide Phe-Gly-Gly, neutral, COOH and NH2 endings

From Dataset: Set of 5 small peptides containing aromatic side chain including set P26

Dataset reference: Valdes, H.; Pluháčková, K.; Pitoňák, M.; Řezáč, J. and Hobza, P. Phys. Chem. Chem. Phys., 2008, 10, 2747–2757

Optimization level: MP2/cc-pVTZ (RI (Resolution of Identity approximation))

Tags: P26, 1 h-bond, NH-O


Structure:

37

O       3.437000       0.225000       0.523000
C       2.386000      -0.336000       0.324000
O       1.276000      -0.123000       1.062000
H       1.526000       0.582000       1.682000
C       2.185000      -1.346000      -0.790000
H       2.886000      -2.157000      -0.599000
H       2.482000      -0.860000      -1.717000
N       0.860000      -1.881000      -0.914000
H       0.146000      -1.358000      -1.408000
C       0.434000      -2.811000      -0.014000
O       1.178000      -3.394000       0.761000
C      -1.073000      -3.026000      -0.034000
H      -1.304000      -3.863000       0.616000
H      -1.416000      -3.236000      -1.047000
N      -1.761000      -1.842000       0.438000
H      -1.890000      -1.668000       1.426000
C      -2.030000      -0.804000      -0.373000
O      -1.785000      -0.802000      -1.583000
C      -2.715000       0.373000       0.320000
N      -2.394000       0.357000       1.745000
H      -1.462000       0.736000       1.879000
H      -3.031000       0.957000       2.254000
H      -3.788000       0.178000       0.230000
C      -2.419000       1.686000      -0.423000
H      -2.711000       1.558000      -1.465000
H      -3.055000       2.461000       0.011000
C      -0.981000       2.112000      -0.342000
C      -0.511000       2.836000       0.761000
H      -1.204000       3.129000       1.540000
C       0.827000       3.226000       0.848000
H       1.167000       3.795000       1.704000
C       1.715000       2.906000      -0.176000
H       2.752000       3.202000      -0.112000
C       1.254000       2.202000      -1.288000
H       1.934000       1.969000      -2.097000
C      -0.078000       1.801000      -1.366000
H      -0.436000       1.255000      -2.228000

save structure as file..



Energies:

method counterpoise corrected remark value
CCSD(T)/CBS (cc-pVTZ to cc-pVQZ extrapolation at MP2 level, CCSD(T) correction in 6-31G* basis set) no cc-pVTZ to cc-pVQZ extrapolation at MP2 level, CCSD(T) correction in 6-31G* basis set 0.31
MP2/CBS (cc-pVTZ to cc-pVQZ extrapolation) no cc-pVTZ to cc-pVQZ extrapolation 0.04
SCS-MP2/CBS (cc-pVTZ to cc-pVQZ extrapolation, SCS scaling factors: 6/5 and 1/3) no cc-pVTZ to cc-pVQZ extrapolation, SCS scaling factors: 6/5 and 1/3 0.51
MP3/CBS (cc-pVTZ to cc-pVQZ extrapolation at MP2 level, MP3 correction in 6-31G* basis set) no cc-pVTZ to cc-pVQZ extrapolation at MP2 level, MP3 correction in 6-31G* basis set 0.64
SCC-DFTB-D no 0.61
AMBER ff99 (HF/6-31G* RESP charges) no HF/6-31G* RESP charges 0.98
AMBER ff99 (B3LYP/cc-pVTZ RESP charges) no B3LYP/cc-pVTZ RESP charges 0.54
DFT TPSS/6-311++G(3df,3pd) no 2.68
DFT-D TPSS/6-311++G(3df,3pd) no 0.65
DFT B3LYP/6-311++G(3df,3pd) no 2.62
DFT M06-2X/6-311+G(2df,2p) no -0.65
DFT BH&H/6-311++G(d,p) no 0.61
DFT-D PBE/6-311++G(3df,3pd) no 0.97